Physiologist’s Friend

webIconNote: the Physiologist’s Friend is sold out and has been discontinued. Contact us if you have any special requests concerning this product.

The Phyiologist’s Friend Chip electronically emulates cells in the visual system and responds realistically to visual stimuli. The complete design has been published.

If you are a physiologist working on the properties of the early visual system, you could use this chip as a simple substitute animal.  You could use it to train students to run your rig. Or you could use it as a set of realistic and known receptive fields with spiking or analog responses for developing new spike-triggered averaging techniques. Or when debugging a new setup, you can use it simply to make sure everything runs as expected. The idea is that experimenters can test nearly the complete loop — which generally involves stimulus generation, recording, and analysis, without using actual animals. Bugs in the large portions of the setup can be found before any animals are used..

If you teach about how the brain works, the chip is a captivating way to involve the students in demonstrations of a number of basic properties of the visual system: adaptation, complementary (ON/OFF) coding, spikes, complementary push-pull input to cortical cells. Using an overhead projector, you can conduct experiments on this model visual system.

The chip outputs an ON and OFF retinal ganglion cell and two orientation-tuned cortical simple cells. Analog membrane potentials are also output and can be used to check spike discrimininators.

There are no adjustments on the chip; it is completely parameter-free. That means it is just like an opamp or ADC; you turn it on and it works. The dozen internal bias currents, which span 6 decades, are generated on-chip by a bias generator. Every chip acts the same; there is no calibration necessary.

A software simulation that models more types of cells is the Physio Friend program.

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The Physiologist’s Friend Chip

Downloads

  • User guide: [PDF]
  • Presentation slides: [PDF] [PPT]
  • T. Delbruck, S.C. Liu. (2004). A silicon visual system as a model animal. Vision Research, vol. 44, issue 17, pp. 2083-2089 (preprint; copyright restrictions prevent putting journal version here.): [PDF]
  • Physiologist’s Friend Chip design: [Link]

Users

The Physiologist’s Friend Chip is used by more than 15 labs around the world.

David van Essen Washington Univ.
Gilles Laurant Caltech
Kevan Martin Inst. of Neuroinformatics, Univ. Zurich & ETH Zurich
Daniel Kiper Inst. of Neuroinformatics, Univ. Zurich & ETH Zurich
Matteo Carrandini Smith Kettelwell
Rich van Wezel Univ Utrecht
Florentin Worgotter Univ. Stirling
Matthias Henning Univ. Stirling
Natalie Hempel de Ibarra Freie Universitaet, Berlin
Rudolf Menzel Freie Universitaet, Berlin
Lyle Borg-Graham Neurophysique et Physiologie du Systeme Moteur CNRS
Ulf Eysel Ruhr Univ. Bochum
Pam Reinigal UC San Diego
Wyeth Bair Univ. of Oxford
Bernd Porr Univ. of Glasgow
Henry Markram EPFL, Lausanne, Switzerland
Lauriston Kellaway University of Cape Town
Sebastian Seung MIT
Prakash Kara Univ. of S. Carolina
Petra Skiebe-Corrette Freie Universitaet, Berlin
Sorinel Oprisan College of Charleston, South Carolina

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Students learn to plot receptive fields of retinal and simple cells.

Links

Matthias Hennig and Bernd Porr at the University of Stirling have used the chip for demonstrations and instruction. They have developed a linux-based USB data acquisition device.